HL_4V7L_070

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

4V7L|1|BA|G|1173, 4V7L|1|BA|A|1174, 4V7L|1|BA|G|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7L_070 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2758

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V7L|1|BA|G|1170
4V7L|1|BA|G|1171
4V7L|1|BA|G|1173
4V7L|1|BA|A|1174
4V7L|1|BA|U|1175
4V7L|1|BA|G|1176
4V7L|1|BA|A|1177
4V7L|1|BA|C|1178
4V7L|1|BA|C|1179

Current chains

Chain BA

23S ribosomal RNA

Nearby chains