3D structure

PDB id
4V7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structures of viomycin bound to the 70S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGCGAAGACAGCCAGUCGAGUG
Length
22 nucleotides
Bulged bases
4V7L|1|DA|A|1046
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7L|1|DA|C|1041
4V7L|1|DA|G|1042
4V7L|1|DA|C|1043
4V7L|1|DA|G|1044
4V7L|1|DA|A|1045
4V7L|1|DA|A|1046
4V7L|1|DA|G|1047
4V7L|1|DA|A|1048
4V7L|1|DA|C|1049
4V7L|1|DA|A|1050
4V7L|1|DA|G|1051
4V7L|1|DA|C|1052
4V7L|1|DA|C|1053
4V7L|1|DA|A|1054
4V7L|1|DA|G|1055
4V7L|1|DA|U|1108
4V7L|1|DA|C|1109
4V7L|1|DA|G|1110
4V7L|1|DA|A|1111
4V7L|1|DA|G|1112
4V7L|1|DA|U|1113
4V7L|1|DA|G|1114

Current chains

Chain DA
23S ribosomal RNA

Nearby chains

Chain DH
50S ribosomal protein L6
Chain DZ
50S ribosomal protein L25

Coloring options:

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