HL_4V7L_188

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAAAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7L_188 not in the Motif Atlas

Geometric match to HL_3IGI_004

Geometric discrepancy: 0.3902

The information below is about HL_3IGI_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4V7L|1|DA|G|1526
4V7L|1|DA|G|1527
4V7L|1|DA|A|1528
4V7L|1|DA|A|1528|||A
4V7L|1|DA|A|1544
4V7L|1|DA|A|1545
4V7L|1|DA|C|1546

Current chains

Chain DA

23S ribosomal RNA

Nearby chains