HL_4V7P_128
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7P_128 not in the Motif Atlas
- Homologous match to HL_4WF9_020
- Geometric discrepancy: 0.1092
- The information below is about HL_4WF9_020
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
4V7P|1|CA|G|629
4V7P|1|CA|G|630
4V7P|1|CA|A|631
4V7P|1|CA|A|632
4V7P|1|CA|A|633
4V7P|1|CA|C|634
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain C5
- 50S ribosomal protein L35
- Chain CL
- 50S ribosomal protein L15
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