HL_4V7P_185
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- CCUUGG
- Length
- 6 nucleotides
- Bulged bases
- 4V7P|1|DA|U|189, 4V7P|1|DA|G|190
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7P_185 not in the Motif Atlas
- Homologous match to HL_4LFB_004
- Geometric discrepancy: 0.1607
- The information below is about HL_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89167.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
4V7P|1|DA|C|186|||G
4V7P|1|DA|C|187
4V7P|1|DA|U|188
4V7P|1|DA|U|189
4V7P|1|DA|G|190
4V7P|1|DA|G|191|||A
Current chains
- Chain DA
- 16S rRNA (1504-MER)
Nearby chains
- Chain DQ
- 30S ribosomal protein S17
- Chain DT
- 30S ribosomal protein S20
Coloring options: