HL_4V7P_189
3D structure
- PDB id
- 4V7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the amber stop codon by release factor RF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- CACUGAGACACGGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7P_189 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.1473
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V7P|1|DA|C|320
4V7P|1|DA|A|321
4V7P|1|DA|C|322
4V7P|1|DA|U|323
4V7P|1|DA|G|324
4V7P|1|DA|A|325
4V7P|1|DA|G|326
4V7P|1|DA|A|327
4V7P|1|DA|C|328
4V7P|1|DA|A|329
4V7P|1|DA|C|330
4V7P|1|DA|G|331
4V7P|1|DA|G|332
4V7P|1|DA|G|333
Current chains
- Chain DA
- 16S rRNA (1504-MER)
Nearby chains
- Chain DP
- 30S ribosomal protein S16
- Chain DT
- 30S ribosomal protein S20
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