HL_4V7P_211

3D structure

PDB id

4V7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Recognition of the amber stop codon by release factor RF1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

GAUCAGAUGCG*C

Length

12 nucleotides

Bulged bases

4V7P|1|DA|U|1364

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7P|1|DA|G|1356
4V7P|1|DA|A|1357
4V7P|1|DA|U|1358
4V7P|1|DA|C|1359
4V7P|1|DA|A|1360
4V7P|1|DA|G|1361
4V7P|1|DA|A|1363
4V7P|1|DA|U|1364
4V7P|1|DA|G|1365
4V7P|1|DA|C|1366
4V7P|1|DA|G|1365
*
4V7P|1|DA|C|1366

Current chains

Chain DA

16S rRNA (1504-MER)

Nearby chains

Chain DC

30S ribosomal protein S3

Chain DI

30S ribosomal protein S9

Chain DJ

30S ribosomal protein S10

Chain DN

30S ribosomal protein S14

Chain DU

30S ribosomal protein Thx