HL_4V7S_083

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

4V7S|1|BA|C|2143, 4V7S|1|BA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7S_083 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.3672

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V7S|1|BA|A|2142
4V7S|1|BA|C|2143
4V7S|1|BA|G|2144
4V7S|1|BA|C|2145
4V7S|1|BA|C|2146
4V7S|1|BA|A|2147
4V7S|1|BA|G|2148
4V7S|1|BA|U|2149

Current chains

Chain BA

23S rRNA

Nearby chains