HL_4V7S_136
3D structure
- PDB id
- 4V7S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to telithromycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 4V7S|1|DA|G|60, 4V7S|1|DA|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7S_136 not in the Motif Atlas
- Geometric match to HL_6N5P_003
- Geometric discrepancy: 0.2726
- The information below is about HL_6N5P_003
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
4V7S|1|DA|U|59
4V7S|1|DA|G|60
4V7S|1|DA|C|61
4V7S|1|DA|U|62
4V7S|1|DA|A|63
4V7S|1|DA|A|64
4V7S|1|DA|U|65
4V7S|1|DA|C|66
4V7S|1|DA|U|67
4V7S|1|DA|G|68
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D2
- 50S ribosomal protein L34
- Chain DT
- 50S ribosomal protein L23
- Chain DY
- 50S ribosomal protein L29
Coloring options: