HL_4V7S_185

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

4V7S|1|DA|A|2030, 4V7S|1|DA|A|2031, 4V7S|1|DA|G|2032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7S_185 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1222

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

8

Unit IDs

4V7S|1|DA|G|2027
4V7S|1|DA|U|2028
4V7S|1|DA|G|2029
4V7S|1|DA|A|2030
4V7S|1|DA|A|2031
4V7S|1|DA|G|2032
4V7S|1|DA|A|2033
4V7S|1|DA|U|2034
4V7S|1|DA|G|2035
4V7S|1|DA|C|2036

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D0

50S ribosomal protein L32

Chain DD

50S ribosomal protein L3