HL_4V7T_158

3D structure

PDB id

4V7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V7T|1|DA|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7T_158 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3211

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V7T|1|DA|U|779
4V7T|1|DA|G|780
4V7T|1|DA|A|781
4V7T|1|DA|A|782
4V7T|1|DA|A|783
4V7T|1|DA|G|784
4V7T|1|DA|G|785

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2