HL_4V7U_068

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

4V7U|1|BA|A|1453, 4V7U|1|BA|C|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7U_068 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1896

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V7U|1|BA|C|1451
4V7U|1|BA|G|1452
4V7U|1|BA|A|1453
4V7U|1|BA|C|1454
4V7U|1|BA|G|1455
4V7U|1|BA|G|1456
4V7U|1|BA|U|1457
4V7U|1|BA|U|1458
4V7U|1|BA|G|1459

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L17