HL_4V7U_158

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V7U|1|DA|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7U_158 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3019

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V7U|1|DA|U|779
4V7U|1|DA|G|780
4V7U|1|DA|A|781
4V7U|1|DA|A|782
4V7U|1|DA|A|783
4V7U|1|DA|G|784
4V7U|1|DA|G|785

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2