HL_4V7U_221

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

ACUACGGU

Length

8 nucleotides

Bulged bases

4V7U|1|DA|A|1535, 4V7U|1|DA|C|1536

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7U_221 not in the Motif Atlas

Geometric match to HL_5XUZ_001

Geometric discrepancy: 0.1563

The information below is about HL_5XUZ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V7U|1|DA|A|1532
4V7U|1|DA|C|1533
4V7U|1|DA|U|1534
4V7U|1|DA|A|1535
4V7U|1|DA|C|1536
4V7U|1|DA|G|1537
4V7U|1|DA|G|1538
4V7U|1|DA|U|1539

Current chains

Chain DA

23S rRNA

Nearby chains