HL_4V7V_160

3D structure

PDB id

4V7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to clindamycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

GCAACAACC

Length

9 nucleotides

Bulged bases

4V7V|1|DA|A|878

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7V|1|DA|G|875
4V7V|1|DA|C|876
4V7V|1|DA|A|877
4V7V|1|DA|A|878
4V7V|1|DA|C|898
4V7V|1|DA|A|899
4V7V|1|DA|A|900
4V7V|1|DA|C|901
4V7V|1|DA|C|902

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DM

50S ribosomal protein L16