HL_4V7W_018

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4V7W|1|AA|U|839, 4V7W|1|AA|U|841

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7W_018 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.3972

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V7W|1|AA|G|837
4V7W|1|AA|G|838
4V7W|1|AA|U|839
4V7W|1|AA|C|840
4V7W|1|AA|U|841
4V7W|1|AA|C|848
4V7W|1|AA|C|849

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AR

30S ribosomal protein S18