HL_4V7W_100
3D structure
- PDB id
- 4V7W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7W_100 not in the Motif Atlas
- Geometric match to HL_7RQB_070
- Geometric discrepancy: 0.1944
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V7W|1|BB|C|38
4V7W|1|BB|A|39
4V7W|1|BB|U|40
4V7W|1|BB|U|41
4V7W|1|BB|C|42
4V7W|1|BB|C|43
4V7W|1|BB|G|44
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L31
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 50S ribosomal protein L5
- Chain BS
- 50S ribosomal protein L18
Coloring options: