HL_4V7W_191

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7W_191 not in the Motif Atlas

Homologous match to HL_7RQB_060

Geometric discrepancy: 0.263

The information below is about HL_7RQB_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V7W|1|DA|C|2471
4V7W|1|DA|G|2472
4V7W|1|DA|U|2473
4V7W|1|DA|C|2474
4V7W|1|DA|C|2475
4V7W|1|DA|A|2476
4V7W|1|DA|C|2477
4V7W|1|DA|A|2478
4V7W|1|DA|G|2479

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DQ

50S ribosomal protein L16