HL_4V7W_218

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGUUGCCAGCGGUUCGGCCGGGCACUCU

Length

28 nucleotides

Bulged bases

4V7W|1|CA|U|1125, 4V7W|1|CA|U|1136, 4V7W|1|CA|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7W|1|CA|A|1123
4V7W|1|CA|G|1124
4V7W|1|CA|U|1125
4V7W|1|CA|U|1126
4V7W|1|CA|G|1127
4V7W|1|CA|C|1128
4V7W|1|CA|C|1129
4V7W|1|CA|A|1130
4V7W|1|CA|G|1131
4V7W|1|CA|C|1132
4V7W|1|CA|G|1133
4V7W|1|CA|G|1134
4V7W|1|CA|U|1135
4V7W|1|CA|U|1136
4V7W|1|CA|C|1137
4V7W|1|CA|G|1138
4V7W|1|CA|G|1139
4V7W|1|CA|C|1140
4V7W|1|CA|C|1141
4V7W|1|CA|G|1142
4V7W|1|CA|G|1143
4V7W|1|CA|G|1144
4V7W|1|CA|C|1145
4V7W|1|CA|A|1146
4V7W|1|CA|C|1147
4V7W|1|CA|U|1148
4V7W|1|CA|C|1149
4V7W|1|CA|U|1150

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10