HL_4V7X_094

3D structure

PDB id

4V7X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7X_094 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2076

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

4V7X|1|BA|C|2658
4V7X|1|BA|G|2659
4V7X|1|BA|A|2660
4V7X|1|BA|G|2661
4V7X|1|BA|A|2662
4V7X|1|BA|G|2663

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BH

50S ribosomal protein L6