HL_4V7Y_210

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUGAAAGCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7Y_210 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3124

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4V7Y|1|AA|G|1010
4V7Y|1|AA|G|1011
4V7Y|1|AA|U|1012
4V7Y|1|AA|G|1013
4V7Y|1|AA|A|1014
4V7Y|1|AA|A|1015
4V7Y|1|AA|A|1016
4V7Y|1|AA|G|1017
4V7Y|1|AA|C|1018
4V7Y|1|AA|C|1019

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19