HL_4V7Y_221

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGUUGCCAGCGGUUCGGCCGGGCACUCU

Length

28 nucleotides

Bulged bases

4V7Y|1|CA|U|1125, 4V7Y|1|CA|U|1136, 4V7Y|1|CA|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7Y|1|CA|A|1123
4V7Y|1|CA|G|1124
4V7Y|1|CA|U|1125
4V7Y|1|CA|U|1126
4V7Y|1|CA|G|1127
4V7Y|1|CA|C|1128
4V7Y|1|CA|C|1129
4V7Y|1|CA|A|1130
4V7Y|1|CA|G|1131
4V7Y|1|CA|C|1132
4V7Y|1|CA|G|1133
4V7Y|1|CA|G|1134
4V7Y|1|CA|U|1135
4V7Y|1|CA|U|1136
4V7Y|1|CA|C|1137
4V7Y|1|CA|G|1138
4V7Y|1|CA|G|1139
4V7Y|1|CA|C|1140
4V7Y|1|CA|C|1141
4V7Y|1|CA|G|1142
4V7Y|1|CA|G|1143
4V7Y|1|CA|G|1144
4V7Y|1|CA|C|1145
4V7Y|1|CA|A|1146
4V7Y|1|CA|C|1147
4V7Y|1|CA|U|1148
4V7Y|1|CA|C|1149
4V7Y|1|CA|U|1150

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10