HL_4V7Z_176

3D structure

PDB id

4V7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUGAUGAGCC

Length

11 nucleotides

Bulged bases

4V7Z|1|DA|U|1739, 4V7Z|1|DA|G|1740

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7Z_176 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.1507

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

4V7Z|1|DA|G|1718
4V7Z|1|DA|G|1719
4V7Z|1|DA|U|1720
4V7Z|1|DA|G|1721
4V7Z|1|DA|A|1722
4V7Z|1|DA|U|1739
4V7Z|1|DA|G|1740
4V7Z|1|DA|A|1741
4V7Z|1|DA|G|1742
4V7Z|1|DA|C|1743
4V7Z|1|DA|C|1744

Current chains

Chain DA

23S ribosomal RNA

Nearby chains