HL_4V83_139
3D structure
- PDB id
- 4V83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- AUUAAGUGGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
4V83|1|CV|A|6160
4V83|1|CV|U|6161
4V83|1|CV|U|6162
4V83|1|CV|A|6163
4V83|1|CV|A|6164
4V83|1|CV|G|6165
4V83|1|CV|U|6166
4V83|1|CV|G|6167
4V83|1|CV|G|6168
4V83|1|CV|U|6169
Current chains
- Chain CV
- domain 3 of PSIC IGR IRES RNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CI
- 30S ribosomal protein S9
Coloring options: