HL_4V84_036
3D structure
- PDB id
- 4V84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGGUAGCGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V84_036 not in the Motif Atlas
- Homologous match to HL_7RQB_002
- Geometric discrepancy: 0.0937
- The information below is about HL_7RQB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
4V84|1|BA|C|87
4V84|1|BA|G|88
4V84|1|BA|G|89
4V84|1|BA|U|90
4V84|1|BA|A|91
4V84|1|BA|G|92
4V84|1|BA|C|93
4V84|1|BA|G|94
4V84|1|BA|G|95
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BT
- 50S ribosomal protein L23
- Chain BU
- 50S ribosomal protein L24
- Chain BY
- 50S ribosomal protein L29
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