HL_4V85_022

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V85_022 not in the Motif Atlas

Geometric match to HL_4Y1M_004

Geometric discrepancy: 0.2017

The information below is about HL_4Y1M_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V85|1|AA|A|1012
4V85|1|AA|G|1013
4V85|1|AA|A|1014
4V85|1|AA|G|1015
4V85|1|AA|A|1016
4V85|1|AA|U|1017

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19