HL_4V85_043
3D structure
- PDB id
- 4V85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4V85|1|BA|G|329, 4V85|1|BA|A|330, 4V85|1|BA|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V85_043 not in the Motif Atlas
- Homologous match to HL_4WF9_012
- Geometric discrepancy: 0.1008
- The information below is about HL_4WF9_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.4
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 16
Unit IDs
4V85|1|BA|G|327
4V85|1|BA|U|328
4V85|1|BA|G|329
4V85|1|BA|A|330
4V85|1|BA|C|331
4V85|1|BA|A|332
4V85|1|BA|G|333
4V85|1|BA|C|334
4V85|1|BA|C|335
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BE
- 50S ribosomal protein L4
- Chain BY
- 50S ribosomal protein L24 1
Coloring options: