HL_4V85_096

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V85_096 not in the Motif Atlas

Homologous match to HL_7RQB_064

Geometric discrepancy: 0.0882

The information below is about HL_7RQB_064

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4V85|1|BA|C|2658
4V85|1|BA|G|2659
4V85|1|BA|A|2660
4V85|1|BA|G|2661
4V85|1|BA|A|2662
4V85|1|BA|G|2663

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AW

Peptide chain release factor 3

Chain BG

50S ribosomal protein L6