HL_4V87_008
3D structure
- PDB id
- 4V87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V87_008 not in the Motif Atlas
- Homologous match to HL_7RQB_008
- Geometric discrepancy: 0.0655
- The information below is about HL_7RQB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.7
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V87|1|AA|C|246
4V87|1|AA|G|247
4V87|1|AA|G|248
4V87|1|AA|C|249
4V87|1|AA|G|250
4V87|1|AA|A|251
4V87|1|AA|G|252
Current chains
- Chain AA
- RNA (2909-MER)
Nearby chains
- Chain A8
- 50S ribosomal protein L35
- Chain AO
- 50S ribosomal protein L15
- Chain AZ
- 50S ribosomal protein L28
- Chain BD
- Transfer RNA; tRNA
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