HL_4V88_107

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGANNNNNNNNNNNNNNUCUC

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V88|1|A2|G|1690
4V88|1|A2|A|1691
4V88|1|A2|G|1692
4V88|1|A2|A|1693
4V88|1|A2|N|1694
4V88|1|A2|N|1695
4V88|1|A2|N|1696
4V88|1|A2|N|1697
4V88|1|A2|N|1698
4V88|1|A2|N|1699
4V88|1|A2|N|1700
4V88|1|A2|N|1701
4V88|1|A2|N|1702
4V88|1|A2|N|1703
4V88|1|A2|N|1704
4V88|1|A2|N|1705
4V88|1|A2|N|1706
4V88|1|A2|N|1707
4V88|1|A2|U|1708
4V88|1|A2|C|1709
4V88|1|A2|U|1710
4V88|1|A2|C|1711

Current chains

Chain A2

18S RIBOSOMAL RNA

Nearby chains

Chain AG

40S ribosomal protein S6-A

Chain BW

60S ribosomal protein L24-A