HL_4V88_140
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 4V88|1|A5|A|1245
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03271.1
- Basepair signature
- cWW-R-R-R-tSH-R-R
- Number of instances in this motif group
- 10
Unit IDs
4V88|1|A5|C|1239
4V88|1|A5|A|1240
4V88|1|A5|U|1241
4V88|1|A5|G|1242
4V88|1|A5|G|1243
4V88|1|A5|A|1244
4V88|1|A5|A|1245
4V88|1|A5|G|1246
4V88|1|A5|U|1247
4V88|1|A5|C|1248
4V88|1|A5|G|1249
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain DK
- Ribosomal protein L12
Coloring options: