3D structure

PDB id
4V88 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of the eukaryotic ribosome at 3.0 A resolution.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUCNNNNNNNNNNNNAC
Length
17 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V88|1|A6|G|656
4V88|1|A6|U|657
4V88|1|A6|C|658
4V88|1|A6|N|659
4V88|1|A6|N|660
4V88|1|A6|N|661
4V88|1|A6|N|662
4V88|1|A6|N|663
4V88|1|A6|N|664
4V88|1|A6|N|665
4V88|1|A6|N|666
4V88|1|A6|N|667
4V88|1|A6|N|668
4V88|1|A6|N|669
4V88|1|A6|N|670
4V88|1|A6|A|673
4V88|1|A6|C|674

Current chains

Chain A6
18S rRNA

Nearby chains

Chain CC
40S ribosomal protein S2
Chain CJ
40S ribosomal protein S9-A
Chain CV
40S ribosomal protein S21-A

Coloring options:

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