HL_4V88_202

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUUGUG

Length

7 nucleotides

Bulged bases

4V88|1|A6|U|718

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98928.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

1

Unit IDs

4V88|1|A6|C|716
4V88|1|A6|C|717
4V88|1|A6|U|718
4V88|1|A6|U|719
4V88|1|A6|G|720
4V88|1|A6|U|721
4V88|1|A6|G|722

Current chains

Chain A6

18S rRNA

Nearby chains