HL_4V88_210
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGAAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Other HL
- Broad Annotation
- Other HL
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
4V88|1|A6|A|1084
4V88|1|A6|G|1085
4V88|1|A6|A|1086
4V88|1|A6|A|1087
4V88|1|A6|A|1088
4V88|1|A6|U|1089
Current chains
- Chain A6
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S2
- Chain CW
- 40S ribosomal protein S22-A
- Chain Ca
- 40S ribosomal protein S26-A
Coloring options: