HL_4V88_233
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGGCCCAUUCGGGUCU
- Length
- 16 nucleotides
- Bulged bases
- 4V88|1|A2|U|493, 4V88|1|A2|U|494, 4V88|1|A2|C|495
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V88|1|A2|G|486
4V88|1|A2|G|487
4V88|1|A2|G|488
4V88|1|A2|C|489
4V88|1|A2|C|490
4V88|1|A2|C|491
4V88|1|A2|A|492
4V88|1|A2|U|493
4V88|1|A2|U|494
4V88|1|A2|C|495
4V88|1|A2|G|496
4V88|1|A2|G|497
4V88|1|A2|G|498
4V88|1|A2|U|499
4V88|1|A2|C|500
4V88|1|A2|U|501
Current chains
- Chain A2
- 18S RIBOSOMAL RNA
Nearby chains
- Chain AJ
- 40S ribosomal protein S9-A
- Chain Ae
- 40S ribosomal protein S30-A
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