HL_4V88_242
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAGAGANNNNNNNNNNNNNNUCUCAG
- Length
- 26 nucleotides
- Bulged bases
- 4V88|1|A6|N|1694, 4V88|1|A6|N|1695, 4V88|1|A6|N|1696, 4V88|1|A6|N|1697, 4V88|1|A6|N|1698, 4V88|1|A6|N|1699, 4V88|1|A6|N|1700, 4V88|1|A6|N|1701, 4V88|1|A6|N|1702, 4V88|1|A6|N|1703, 4V88|1|A6|N|1704, 4V88|1|A6|N|1705, 4V88|1|A6|N|1706, 4V88|1|A6|N|1707
- QA status
- Modified nucleotides:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V88|1|A6|U|1688
4V88|1|A6|A|1689
4V88|1|A6|G|1690
4V88|1|A6|A|1691
4V88|1|A6|G|1692
4V88|1|A6|A|1693
4V88|1|A6|N|1694
4V88|1|A6|N|1695
4V88|1|A6|N|1696
4V88|1|A6|N|1697
4V88|1|A6|N|1698
4V88|1|A6|N|1699
4V88|1|A6|N|1700
4V88|1|A6|N|1701
4V88|1|A6|N|1702
4V88|1|A6|N|1703
4V88|1|A6|N|1704
4V88|1|A6|N|1705
4V88|1|A6|N|1706
4V88|1|A6|N|1707
4V88|1|A6|U|1708
4V88|1|A6|C|1709
4V88|1|A6|U|1710
4V88|1|A6|C|1711
4V88|1|A6|A|1712
4V88|1|A6|G|1713
Current chains
- Chain A6
- 18S rRNA
Nearby chains
- Chain CG
- 40S ribosomal protein S6-A
- Chain DW
- 60S ribosomal protein L24-A
Coloring options: