HL_4V8C_211

3D structure

PDB id

4V8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8C_211 not in the Motif Atlas

Homologous match to HL_6CZR_235

Geometric discrepancy: 0.5627

The information below is about HL_6CZR_235

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8C|1|DA|C|1028|||B
4V8C|1|DA|G|1029
4V8C|1|DA|C|1030
4V8C|1|DA|G|1031
4V8C|1|DA|A|1032
4V8C|1|DA|G|1032|||A

Current chains

Chain DA

16S ribosomal RNA

Nearby chains