HL_4V8D_075

3D structure

PDB id

4V8D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8D_075 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3638

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V8D|1|BA|G|1170
4V8D|1|BA|G|1171
4V8D|1|BA|G|1173
4V8D|1|BA|A|1174
4V8D|1|BA|U|1175
4V8D|1|BA|G|1176
4V8D|1|BA|A|1177
4V8D|1|BA|C|1178
4V8D|1|BA|C|1179

Current chains

Chain BA

RNA (2912-MER)

Nearby chains