HL_4V8D_229

3D structure

PDB id

4V8D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUCAAG

Length

7 nucleotides

Bulged bases

4V8D|1|DA|U|2797

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8D_229 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.1216

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V8D|1|DA|C|2794
4V8D|1|DA|G|2795
4V8D|1|DA|U|2797
4V8D|1|DA|C|2798
4V8D|1|DA|A|2799
4V8D|1|DA|A|2801
4V8D|1|DA|G|2802

Current chains

Chain DA

RNA (2912-MER)

Nearby chains