HL_4V8G_013

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8G_013 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.2565

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V8G|1|AA|C|522
4V8G|1|AA|A|523
4V8G|1|AA|G|524
4V8G|1|AA|C|525
4V8G|1|AA|C|526
4V8G|1|AA|G|527

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AL

30S Ribosomal Protein S12