HL_4V8G_168

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUACG

Length

6 nucleotides

Bulged bases

4V8G|1|DA|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8G_168 not in the Motif Atlas

Homologous match to HL_5J7L_171

Geometric discrepancy: 0.5307

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V8G|1|DA|C|1532
4V8G|1|DA|G|1533
4V8G|1|DA|U|1534
4V8G|1|DA|A|1535
4V8G|1|DA|C|1536
4V8G|1|DA|G|1537

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains