HL_4V8G_204

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAGCAACGCG

Length

12 nucleotides

Bulged bases

4V8G|1|AA|G|971

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8G_204 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3514

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

4V8G|1|AA|C|962
4V8G|1|AA|G|963
4V8G|1|AA|A|964
4V8G|1|AA|A|965
4V8G|1|AA|G|966
4V8G|1|AA|C|967
4V8G|1|AA|A|968
4V8G|1|AA|A|969
4V8G|1|AA|C|970
4V8G|1|AA|G|971
4V8G|1|AA|C|972
4V8G|1|AA|G|973

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AI

30S Ribosomal Protein S9

Chain AJ

30S Ribosomal Protein S10

Chain AN

30S Ribosomal Protein S14