HL_4V8O_062

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

4V8O|1|BA|C|888, 4V8O|1|BA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|BA|G|875
4V8O|1|BA|C|876
4V8O|1|BA|U|877
4V8O|1|BA|A|878
4V8O|1|BA|G|879
4V8O|1|BA|G|880
4V8O|1|BA|G|881
4V8O|1|BA|G|882
4V8O|1|BA|G|883
4V8O|1|BA|C|884
4V8O|1|BA|C|885
4V8O|1|BA|C|886
4V8O|1|BA|A|887
4V8O|1|BA|C|888
4V8O|1|BA|C|889
4V8O|1|BA|A|890
4V8O|1|BA|G|892
4V8O|1|BA|C|893
4V8O|1|BA|C|894
4V8O|1|BA|U|895
4V8O|1|BA|A|896
4V8O|1|BA|C|897
4V8O|1|BA|C|898
4V8O|1|BA|A|899
4V8O|1|BA|A|900
4V8O|1|BA|A|901
4V8O|1|BA|C|902

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AM

30S RIBOSOMAL PROTEIN S13

Chain AS

30S RIBOSOMAL PROTEIN S19

Chain BG

50S RIBOSOMAL PROTEIN L5

Chain BQ

50S RIBOSOMAL PROTEIN L16

Chain BZ

50S RIBOSOMAL PROTEIN L25