HL_4V8O_074

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGUACG

Length

6 nucleotides

Bulged bases

4V8O|1|BA|U|1534

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8O_074 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2908

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V8O|1|BA|C|1532
4V8O|1|BA|G|1533
4V8O|1|BA|U|1534
4V8O|1|BA|A|1535
4V8O|1|BA|C|1536
4V8O|1|BA|G|1537

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains