HL_4V8O_114

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

4V8O|1|BA|A|196, 4V8O|1|BA|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|BA|G|188
4V8O|1|BA|G|189
4V8O|1|BA|A|190
4V8O|1|BA|A|191
4V8O|1|BA|C|192
4V8O|1|BA|U|193
4V8O|1|BA|G|194
4V8O|1|BA|A|195
4V8O|1|BA|A|196
4V8O|1|BA|A|197
4V8O|1|BA|C|198
4V8O|1|BA|A|199
4V8O|1|BA|U|200
4V8O|1|BA|C|201
4V8O|1|BA|U|202
4V8O|1|BA|C|203
4V8O|1|BA|A|204
4V8O|1|BA|G|205
4V8O|1|BA|U|206
4V8O|1|BA|A|207
4V8O|1|BA|C|208

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S RIBOSOMAL PROTEIN L28

Chain B7

50S RIBOSOMAL PROTEIN L34

Chain B8

50S RIBOSOMAL PROTEIN L35

Chain BP

50S RIBOSOMAL PROTEIN L15