3D structure

PDB id
4V8U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
CAGCGGUUCGGCCGG
Length
15 nucleotides
Bulged bases
4V8U|1|CA|U|1136
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V8U|1|CA|C|1129
4V8U|1|CA|A|1130
4V8U|1|CA|G|1131
4V8U|1|CA|C|1132
4V8U|1|CA|G|1133
4V8U|1|CA|G|1134
4V8U|1|CA|U|1135
4V8U|1|CA|U|1136
4V8U|1|CA|C|1137
4V8U|1|CA|G|1138
4V8U|1|CA|G|1139
4V8U|1|CA|C|1140
4V8U|1|CA|C|1141
4V8U|1|CA|G|1142
4V8U|1|CA|G|1143

Current chains

Chain CA
16S RIBOSOMAL RNA

Nearby chains

Chain CI
30S RIBOSOMAL PROTEIN S9

Coloring options:

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