HL_4V8U_227

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CCGGGAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V8U_227 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.2986

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4V8U|1|BA|C|486
4V8U|1|BA|C|487
4V8U|1|BA|G|488
4V8U|1|BA|G|489
4V8U|1|BA|G|491
4V8U|1|BA|A|492
4V8U|1|BA|G|493
4V8U|1|BA|G|494

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BW

50S RIBOSOMAL PROTEIN L22