HL_4V8X_137

3D structure

PDB id

4V8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Thermus thermophilus ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

GGAUCAGCCAUGCC

Length

14 nucleotides

Bulged bases

4V8X|1|CA|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8X|1|CA|G|1355
4V8X|1|CA|G|1356
4V8X|1|CA|A|1357
4V8X|1|CA|U|1358
4V8X|1|CA|C|1359
4V8X|1|CA|A|1360
4V8X|1|CA|G|1361
4V8X|1|CA|C|1362
4V8X|1|CA|C|1363
4V8X|1|CA|A|1363|||A
4V8X|1|CA|U|1364
4V8X|1|CA|G|1365
4V8X|1|CA|C|1366
4V8X|1|CA|C|1367

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CI

30S RIBOSOMAL PROTEIN S9

Chain CJ

30S RIBOSOMAL PROTEIN S10

Chain CM

30S RIBOSOMAL PROTEIN S13

Chain CN

30S RIBOSOMAL PROTEIN S14 TYPE Z

Chain CU

30S RIBOSOMAL PROTEIN THX