HL_4V8X_226
3D structure
- PDB id
- 4V8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Thermus thermophilus ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GCCGUGAGGU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8X_226 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.3409
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4V8X|1|CA|G|1074
4V8X|1|CA|C|1075
4V8X|1|CA|C|1076
4V8X|1|CA|G|1077
4V8X|1|CA|U|1078
4V8X|1|CA|G|1079
4V8X|1|CA|A|1080
4V8X|1|CA|G|1081
4V8X|1|CA|G|1082
4V8X|1|CA|U|1083
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CB
- 30S RIBOSOMAL PROTEIN S2
- Chain CE
- 30S RIBOSOMAL PROTEIN S5
- Chain CH
- 30S RIBOSOMAL PROTEIN S8
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