HL_4V8X_229

3D structure

PDB id

4V8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Thermus thermophilus ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

GCCUACGGGC

Length

10 nucleotides

Bulged bases

4V8X|1|CA|A|1447, 4V8X|1|CA|C|1452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8X|1|CA|G|1443
4V8X|1|CA|C|1444
4V8X|1|CA|C|1445
4V8X|1|CA|U|1446
4V8X|1|CA|A|1447
4V8X|1|CA|C|1452
4V8X|1|CA|G|1456
4V8X|1|CA|G|1457
4V8X|1|CA|G|1458
4V8X|1|CA|C|1459

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain DT

50S RIBOSOMAL PROTEIN L19